Food microbial fluxes under the magnifying glass of multi-omic data integration

Published: Oct 18, 2023 by FME Lab

In our last article¹ published online this Wednesday 18th of October in frontiers in Microbiology, we demonstrate how an ambitious meta-omics sampling strategy can be holistically integrated to reveal the secrets of microbial flux within food production. Our paper focuses on spoilage scenarios in meat products, but the concept can be applied broadly to all types of food. We demonstrate that, in addition to studying the parameters influencing microbial flux, it is also possible to highlight certain metabolic interactions between micro-organisms. Many thanks to the ANR for funding this project, and a wave of congratulations to all our colleagues in this consortium.

Poirier, S. et al. Holistic integration of omics data reveals the drivers that shape the ecology of microbial meat spoilage scenarios. Front. Microbiol. 14, 1286661 (2023). ↩

Lovely second annual meeting of DOMINO project in Cork, Ireland

The DOMINO project held its second annual meeting from 26 to 28 March in the picturesque city of Cork, Ireland. It was an intense and warm moment thanks to the efficient and very friendly organisation of Teagasc and its incredible team coordinated by Orla O’Sullivan and John Kenny.

Health promoting effects of Fermented Foods was the highlight at 2nd Forum on Fermented Foods in Malaga

#DominoEU researchers participated significantly to this amazing conference organised by the COST Pimento. Paul Cotter, Orla O’Sullivan, Jekaterina Kansatseva, Bastien Renard, Isabelle Savary-Auzeloux, Luca Cocolin, Kelly Rantsiou and Tanja Kostic gave talks.

Metagenomic driven isolation of poorly culturable species in food

A new article entitled “Metagenomic driven isolation of poorly culturable species in food” from Caroline and Pierre has been published in Food microbiology journal¹.

Kothe et al. *Metagenomic driven isolation of poorly culturable species in food. Food Microbiology. 2025 ↩